Note: Numbers in parentheses denote counts of species-specific, 1-against-all base changes that have been dropped from the data
Mitochondrial Genes for 9 Hominids
***cox1
a:humanafrican (1) ;gtacaccatccatcaatctgcgatccccctccaataccaaccataccactcctggccttccagttgaactagccccccccctagctgcctcatctccacccgcaccctcttctcccccccccaaacctcctctttactttcaatactgctgaacacaattaaatcctcccctcccttgttggcacctacgtttacccaccgcttctccttactatcccccaccctcgcttccatctctcgttccaaccttacttacgtctggtgagataggacatccacacat
b:humprobeuro (3) ;gtacaccatccatcaatctgcgatccccctccaataccaaccataccactcctggccttccagttgaactagccccccccctagctgcctcatctccacccgcaccctcttctcccccccccaaacctcctctttactttcaatactgctgaacacaattaaatcctcccctcccttgttggcacctacgtttacccaccgctcctccttactatcccccaccctcacttccatctctcgttccaaccttacttacgtctggtgagataggacatccacacat
c:gorilla (28) ;acatattacccatcaacttataatctctttccagcatcagtcatgctattcccgaccccttagttaggctaatcctccttccaatcgccctacctccacccgcactttctttctctccccccaaattcctttctcacctttaacattactaaatgtacctaacccctccccctcttcctcagcgcttacacccattcgccatctctcctcattatcccctacccctgcctccatcccttattttaaccctgcttatacccaatacgacaggacgtttatgtgt
d:gibbon (41) ;gcgtattactcgctggcccatacctcttcctagaccccaactgtgtcgcctctgattccctagttaaaccgaccctcctttcggccgttctcccccctctcgcatcccaccttcccccttttaaactctccccttactcccagcatcaccaaacatactcgactctctccctcctcccccggcccctatgtccgcttactatccccctccaccaccccttacctctgcctttgctccccattctcaccttattcgtacctaataccacaaagcgctcacgtgc
e:chimpanzee (10) ;acacactacctatcgacttacaattccctcccaacaccagtcatgctgttcccgacccctcaactaaactaacgtcccccctgaccactccattttcacccgcactcccttcctttcctcccgaacttttttcttatctttaatatcgttaaacacaattaactcctctttcttcttgtcgacgtctacactcatccgccaccccctctcactaccctccatccatgcctccaccccctgttccagccctatctacgtttaatgaggcagaacatccacacat
f:pigmychimp (7) ;acacactacccattgacttacaatcccttctcagcactaatcacgctgttcccgatccctcaactaagctaatgtcccccctggccactccactttcacccgcattcccttcctttcctcctgaacttttttctcatctttaacaccgttaaatataattaacttctctttcttcttgtcgacgcctgcactcatccaccatcccccctcactaccttccatccatgcctccaccccctgttccagccctacctacatttaatgaggcaggacgtccgcacat
g:baboon (111) ;atgcaccgtttactagctcataccttcccctaggccctgatcgcatcatctttaatcccctaaccagattggtccccccctcaaccaccctcccccatttaatatctcaccctctcctttccaagcttccccctcatccccggcgttactaaatatgcttgaccttcttctcccccttctaacctttgcgctcgcctaccacccctttctgtcacctttcactcctattttcaccctccacttcaaccttgttcgtactcaataccacgaaatatccatatac
h:orangutan (19) ;gcgcgctgtccatcatcccacacttctctcccaacattggctataccgtccttgactccctcatcgaatcaactcttacctcaatcgtcttatttcattcaacgcccccctcccccattattatgttccttctccccccccaatgtcaccagctgcacccagcccctttccttccccttcactactcataaccgcccattactctccttcaccgcacctcgtttccatccctgttctcaacctcaattccatccacattcaacatcacgaggtacctgtatac
i:sumorang (14) ;gcgcgccgtccgtcatcccacacctctctcccaacatcaactataccacccctaactccctcgtcgaatcaactcttaccttaaccatctcatttcatccagtgcccccctccctcaccatcatatcctctttccccccccgatgccaccagccgcgcccagcccctctccttccccttcactactcacaaccacctattactctccctcgccgcacctcgtttccatccctattttcaacccccattccatccacatccaacgtcacgagatgcccatatac
***cox2
a:humanafrican (0) ;tatcttcgctacccttcccttccgtatttacctactgaacgcgccgccccaggctcctcctcgcgccccaccactccctctacgatatttctggattatatattgcctatcgccatttactaccg
b:humprobeuro (0) ;tatcttcgctacccttcccttccgtatttacctactgaacgcgccgccccaggctcctcctcgcgccccaccactccctctacgatatttctggattatatattgcctatcgccatttgctaccg
c:gorilla (8) ;tatctttacaactcttcctctctgcatccacctaccaagcacgttgccttgaatcctctcccacaccttgtcactccccccatagtgcttttagatcacgcgacaccacttgctgcctaccgcca
d:gibbon (27) ;tacctacacaacctcctcccaccatacctactagtcaaacgcgtcgccccggaccctttcctacataccgttgatttactcgtaatgcttccaatccacgcaatatcacctaatacttgtcatcg
e:chimpanzee (1) ;tattttcactattccccttcttcacatttgtttaccgaacgcgccgctccaggcccttttctataccccaccactttcttcgcagtgttttcagatcacacatcaccaattaccatctaccatcg
f:pigmychimp (2) ;tatcctcactattctccttctccgcatttgtttaccgaacgcgccgctttaggcccttttctataccccaccacttccttcgcagtgttttcagatcacacatcactaattaccgtctaccatca
g:baboon (55) ;tactcacacaacctcctctaattacacctaccagccaaatacattaccccgaatcctttcctacgtactactactccatccgcaatgctcccaaaccacacgacattaaccaacgcttatcacca
h:orangutan (2) ;cgtctctatggctccccccatccgcccctacctatcagatataccatctcaaaccttcctctgcgttttgctgacccccctacagcgtccctgatccgcacaacattatctgtcacccaccgtta
i:sumorang (6) ;cgtctctatggctccccccatccgcccccgcctaccaggtataccatcccagaccttcccctacgctctgctgacccccccacagcgtccctaatccgcacaacactatctgtcacccgccatta
***cox3
a:humanafrican (1) ;accatttcaaagcgccaggtctacatctcgccacccagctaacaacctcgcattttctcctccgcgtcatacctcttcccaatgttattgtcttgccgctctcctcccccttgaatttttatcttttcccgtttattcctt
b:humprobeuro (2) ;accatttcaaagcgccaggtctacatctcaccacccagctaacaacctcgcattttctcctctgcgtcatacctcttcccaatgttattgtcttgccgctctcctcccccttgaatttttatcttttcccgtttattcctt
c:gorilla (15) ;atcattccaaagcactagacccacatctcaccatccaattaataactctacattctccctctcacactacgtccctcctctatatcattgccccgccgcttgcttcttctttgagcctttactttcccttgcccacccccc
d:gibbon (22) ;accccctctgggtaacagaccccaacctaatcgcccggccagtagattcatattcctttacccacaccccgcccccccctaacatcaccacactatcatttgtcccccttctgggctcacacccccccttatctgctcccc
e:chimpanzee (4) ;accatcccaaagcaccggactcacaccttatcacttaacttatagccctgctttttttttcccgtatcatattctccttcaatgttgtcatcttgccattcttttctcccctgaacttttacctctctccacccattttct
f:pigmychimp (3) ;gccatttcagagcaccagactcacaccttatcacttaacttatgaccccactctttttttcccatatcatattctccttcaatactattatctcgccactcttttctcccctgagcttttacctctctccgcccattccct
g:baboon (68) ;accctccctaaacaataaactccaacctcgctgtccagtctataaacccatatccccccatttaccctccacctccccttaacattatcacaccatcacttgcttcctttttgaatccacactcccctctacttgctttct
h:orangutan (12) ;gttaccctaggacaacggacccaattacaaccgcccgaatagtgacttcgcaccctctcacccatcccacattctccccttctaccgctacaccgctgcatgccctccccccaaccttatgcccccttctactcatcccct
i:sumorang (15) ;gctaccctaaaataacaagcccaattaccactgcccgaatagtaactctacaccctcccactcatcccacatcctcccttactaccactacaccgctacatgtcctccccccagcctcttgcccctttccgctcgtccccc
***coxb
a:humanafrican (1) ;tttctctccccgcactcgccacgcctactcttctcttctttcatctctcttcctccgctgctgccattgagttaatgataaagcgtctttcctgttgggcctgcccaattctctccctctcttctgttcagcattcctcgatcccatctcctatccgatcatctaattctcatccgcgagttctcctctagtacaccatatagt
b:humprobeuro (4) ;tctctctccccgcactcgccacgcctactcttctcttctttcatctctcttcctccgctgctgccactgagttaatgataaagcgtctttcctgttggacctgcccaattctctccctctcttctgttcagcattcctcgatcccatctcctatccgatcatctaattctcatccgcgagttctcctctagtacaccatatag
c:gorilla (30) ;tctatctccccacacttaccacactcacctctccctctctccacctctccccccccaccaccgccactacactagcaacaaggtgctttctccaccaaattcactccctcccctcctccttcactattcagcacctcccaatctcgtcctcaattcgattattcaatctctacccatgagcccctccctggtacactacgcaat
d:gibbon (56) ;tctaccctcttatacatgctatactcacccccctcttccttcacccctttctttccaccgccgccgctacgccgacaacagggtacccttcccatcaggcccacctctccccttccttccccatcactccgcgctctccaactcagtattcaccacgatcgcacaattcctccccgtaaattcttccctagcacaacgcacaat
e:chimpanzee (9) ;cttattttctcgcgtccaccatacccgcccctttctctcttcatctctctccttctgccaccgctgctacatcaacagcgaggcgctctctctaccaaatctatccaatctcctcttcttccatcgttcagtactctctagcttcaccccccactaagctgtccaattcctgcccgcaagtccctccccagtacactgcacgat
f:pigmychimp (9) ;ctcattttctcacatccaccacacccgtccctttctttccccgtctctctcctcctgccaccgctgctacgtcaacaccaaggcgctccctccatcaaatctatccaatctccccttcttccgccatttagtatcccctggtttcatccctcactcggttatccaattcctgcccgcaagtccctccccggtgcactatacgat
g:baboon (102) ;tctcctttcccatgttcactacacccacccctccctctccttgccccttctttcacgctatcaccgctaagctggcactggggcacaccacccaccgaactcatttatccccccttttcctcgccacttcacgctccccgacccagcatccactacggccatacaatccttcctcgcaaaccttctctccatatactgcacaa
h:orangutan (15) ;tccatcccactgcgtataattcatctatttccctacttcctcactcaccctcttacgttatcatcaccacatcgataacaggatgcatctcacactaaacccatccacttcctttctctttcgccatccaacaccttctgaccccgcacctacataaaccgctcggcctttccctatacgttttttcttcgtattcctcgcaat
i:sumorang (14) ;cccaccctaccgcgcataactcatctacttccctacctctttactcacccccccacattactatcatcacaccaatagcaagatgcaccacacattaaacccatccactcccctcctctttcgccacccaacaccttctaatcccgcacctacacaaactgcccggcttttctttatgcgtttctccctcacgctactcgcaat
***nadh1
a:humanafrican (0) ;taggcacctagcttacgtcgcactcaccgcgatcccccggattctccaggccccttagtacgacgcgatgccactacactattcctcatctcgtatgcaccgaactggccctcccccctcacatccatcgctatttgtcgatccgttgccaccatttatgcttatatt
b:humprobeuro (3) ;taggcacctagcttacgtcgcactcaccgcgatcccccggattctccaggtcccttagtacgacgcgatgccactacactattcctcatctcgtatgcaccgaactggccctcccccctcacatccatcgctatttgtcgatccgttgccaccatttatgcttatatt
c:gorilla (22) ;taggcacttcacttacgccgcactcaccgctatcccccgaatttcccaagctccccagtccggtgcaatgccatcacaccgttccccatcccaaatatactagaccgatttttcctctctacatttactgcaatccatcaatccactgttgctgctcatatccatatt
d:gibbon (42) ;tgaatgccccacccacaccccgccaaccactaccctctgaatctcccaaacccttcgaccaaacacgatgctatcacgtcgctccctgtcccaagcatattaaaccagactctacctttcgaactcaccgcaatccactaactcaccaccgctactaatatccatata
e:chimpanzee (8) ;cagacacctaacctacattgtgctcactatttttccccgaacctctcaagctttttagtacgatacaacgctatcacaccatctttcgtccagaacgcatcgaattaatttttcttcttcacgtccactacaatttgtcagtccgctgttaccatccgtacctatact
f:pigmychimp (8) ;cagacacttaacctacatcatgctcaccatttttcttcgaatccctcgagctttttagtacaatataacgctattacaccatctttcatccagaatgcatcagattaatccttatccttcacgtccactacaatctgtcggttcgctattaccatccgtatctatact
g:baboon (82) ;tgaatatcccgtttgtattacaccaactactactttccgcgccttctaaatctctcgaccaggcacaacgtcaccatattatcccctatccaatacatatcaaactaaaccttaccctctgaacccaccacaatctactaacctaccgccgtcgctcatactcgtact
h:orangutan (13) ;tgaatgtttcattcgtaccccattccacactacctctttcgcctcccgaaccccccaacccaacatagcaccctcgtgtcactccccgcaccatgtaccacaagctaactcccaccccccgcgttttccataccccactaacctactaccgtcactaacacttacgta
i:sumorang (18) ;tgaatatctcatccacatcccatcccacactatccctttcgcctcctgaacccttcaacccaacatggcatcctcgtgtcactccccacaccatacaccacaagccaactcccacctcccgcattttccataccccactaacccactaccgtcactaacacttgcgta
***nadh2
a:humanafrican (1) ;tgcgtatgccccgagtttagaccgacttattactttcgtcagcactcacttctattaatctatcgtcactcccgttccctcacagtgcttcctaccacttgactatcaactacattttcttttttgatataccctccgaacctcccccagcttgggccctacaacctcctaccctcccctatctgttcaccctctttatcttag
b:humprobeuro (2) ;tgcgtatgccccgagtttagaccgatttgttactttcgtcagcactcacttctattaatctatcgtcactcccgttccctcacagtgcttcctaccacttgactatcaactacattttcttttttgatataccctccgaacctcccccagcttgggccctacaacctcctaccctcccctatctgttcatcctctttatctt
c:gorilla (30) ;cgcatacgcttcaactttggaccaattcgctatccccatcaatacccacccccactaatctttcaccaccttcacccccctaaagtgctttccaccacccagtcactgattatatttccctttttaatacaccctttagatcccccccaacccagcttctataactccctgtcccctcttacctgctccttttccctattctag
d:gibbon (58) ;tatacacgtctcaaacccaggacaacccgttatccttatcgacatcaatccctgccaacatttcacaacctccacccccccggagtaacctctatcgtccaatcaccgccagcccccctcccctagacacgccttctaacttcccataaacccaactctcacggcttatcatcccacaccacctgtcttccttccacaccccag
e:chimpanzee (6) ;tacatatacctcgaattcagactaattcactgcccccactaatgtccgcccctattaatttattatcacctccacccttctacagtactctctgctacccaaccaccacttacattttcctccttggtataccctccgaatcccccccaatctaagttctataacctcctatcttctcctatttactccttctctctatcttag
f:pigmychimp (7) ;tacatacgccttgaattcagactaattcgctgccctcactaacgtccacccctattaattcatcatcacctccacccctctacagtactctctgctacccaaccaccacctacattttctttcttagtataccctccgaaccccccccaacctgagttctataacttcccatcttctcctacttattccttctctctatcttag
g:baboon (153) ;cacatgcatcttaaacccggaccaacccaccattcctgctgacaccaatcctcaccaacacttcataacccttacccccccaaaacaatccccactatccagccaccaccaatcccttttctccaaacacgcacttcaacctcccctaaatccgggtctcacaatctattacctcataccgtccacctcttctccaccctcc
h:orangutan (19) ;catacgcacttcagccttgcgccactccgccgcccctatcaacatccacactcgccctttcaccacagtccccacctttccaggacaaccctcatcgtccaaccgccaacaacccccctccttcaaatgtatctcccagactcatacaggcccaagctttgcgattccatatttcccgttgtctactctcccctttccccccag
i:sumorang (20) ;cgcacacacctcagccttgcgatactccgccgcccccatcaacacccgcacccacccttccactacagtccctacctttttgggacaaccctcatcatccaaccgctaatagcccccctcccctagatgtatatcccggacttatataggcccgagccttgtggctccatgttccccgctatccgccctcccctttcccctcag
***nadh3
a:humanafrican (0) ;tccctattttatcccttttccgcactgccatccgctctatctttttttacaatcgttgctctccgatggctgtaatag
b:humprobeuro (0) ;tccctattttatcccttttccgcactgccatccgctctatctttttttacaatcgttgctctccgatggctgtaataa
c:gorilla (3) ;tccccatcttaccctttttctgtaacatcgtccatttcacttctctatgcgactgtcgctcttcaatagccataacga
d:gibbon (21) ;cgcatgccctatttccttcccccaacactctccatacccctccttcacacaaacatcacaccctaacggtcacagcgg
e:chimpanzee (3) ;tctccattttaccttttccccgtactatcatccgcctcacccttctatgtagccgtcacttctcgaccgccatagtaa
f:pigmychimp (1) ;tctccattttacctttttctcgtaatatcatctgcctcacccttctatatagccgtcactcctcgaccgccatggtag
g:baboon (33) ;cgtacgccccgtcctttccttctaatactctatacatccctctcccacgcagacatcgcatcctgacggtcacggcaa
h:orangutan (6) ;tctccgctccattcctcccctccgaaattgcacattccacccccttacacaactaccatatttcggcaatcacaataa
i:sumorang (4) ;tctccgctccgtcccccccccccgaaattgcatattttacccccccacacgactactatattccggcaatcacaatag
***nadh4
a:humanafrican (2) ;cgtttgccaactacttatcttttcatgccaccacctacccgcagtgttctcccattaatttattgctccaacacccaccccccttcctccctagatgcattcaattaggtttaccatctccctcccattcgaccccgccactcttaacagaactcccgtcattcacacccttctattaattttagtctcttcaactggaacctctctccgccccatcttcaacccgtcactccgacctttctct
b:humprobeuro (4) ;cgtttgccaactacttatcttttcatgtcaccacctacccgcagtgttctcccattaatttattgctccaacgcccaccccccttcctccctagatgcattcaattaggtttaccatctccctcccattcgaccccgccactcttaacagaactcccgtcattcacacccttctattaattttagtctcttcaactggaacctctctccgccccatcttcaacccgtcactccgacctttctct
c:gorilla (34) ;cgttcaccaattacccatttttttatactttcacttacctacggcactcccccctcaacttatcgttccaacatctaccctctccctttcttagatgcatacaactagaactgctgcttttctcctatttaacttcgctatcctcaatagagtctccgttgtttatatcaccctaccaaccttggcctcctcagccagaacccccctttatcttatcttacatccatcgccccgattcttctcc
d:gibbon (68) ;tactcgctaaccattcccccttccatacttctactaagtcacaacaccctttccctaacccaccgttctagtacccttccctcccccttaccaagtttacataatcagacccaccacccccccgccctttgaccccaccgccccccgaaatatctttaccgtccaccccatcatgccagctccagtcccttccatcaagtcccttacccacttcattctaaataaactgtcctaaccttttccc
e:chimpanzee (15) ;catttattagttactcacttttttacgttcctacttgtccacggcactcctccctttgtttatcgctccagtacctactccccctctctctaagaagcatgcggtcggacctattgtttttctcccatccaatctcattatccttagcagaactcccattatccacattcctccattaacttcggtccccttcaccggatcccctcctcaccccgtcttcaactcattaccttgatcctcctcc
f:pigmychimp (3) ;tatttattagttactcactttttcacgttttcacctgtccatggcacccccccctttgtctaccgccccagtacctactccccctctctccaagaagcatgcgatcggaactattgttttcctcccattcaatctcattacccttagcagaactcccgtcatttacactcctccattaacttcagcccccttcaccggatccctccctcatcccgtcttcaactcattaccttgattctcctcc
g:baboon (138) ;tactcaccagccacccctctttctacactcccacttggtcacgacacccccttaccaattctccattctaacatcttctctttcttcctacaaaaattacgtaactaaactcgctatccccccgtcccccaattccaccaccccccgaaatgtccctaccatctgtctcctcacgccaattccaactcacccaatcaggtccttcaactactccaccctacacaaattactccaatctcttcct
h:orangutan (21) ;tatccacccaccctccttccccccgcactctttttaacttataacaccacccttccaatcctccatctccacactcatcattccccttcatcgggttcgcacagtcgaacccactacctcttcctcctccatccctgccgtctccagttgagtccccaccacccgtaccaccctattcgccctaattcacccagccaagatttccaaccaccccactccaatcccgccatcccagcctccctac
i:sumorang (26) ;tatccacccacccccctcccccccgcactcttttcaacttacaacaccacccttccagttctccgtctccacgctcatcactccctcttaccgggttcgcgcaatcagacctactacctcttccttcctcatccctaccacctccagctgagtcctcaccacccataccaccctattcaccctaattcacccaaccaagatttccaaccactctaccccaatcccgccactccagccctcctac
***nadh4l
a:humanafrican (1) ;ctctttttagtcccagctgttcacccctgccttggttgccactcagacacctccttgacac
b:humprobeuro (0) ;ctctttttagtcccagctgttcacccctgccttggttgccactcaggcacctccttgacac
c:gorilla (7) ;ttccttttagctacaactgttcacctctgctctgaccaccacttaaacacctctttgacgc
d:gibbon (8) ;ccctcccccactccgatcatctgtacccatcctagtcgttgtttgaacacttctccaccac
e:chimpanzee (2) ;ttttttttagtcacaaccgcccacctctgccttgaccaccacttaaataactttttgacac
f:pigmychimp (5) ;ttttttttagccataatcacccacctctgccttgaccaccacttaaataactttttgacac
g:baboon (27) ;tccctcctcaccatagccatctgtacccatcttaaccattgctcgagccccttctcacagc
h:orangutan (3) ;tcttcccccgccacgattacccaccctcgccccaaccaccatctaaaccctcccctgcagt
i:sumorang (2) ;tcctcccccgccataattattcaccctcgctccaaccaccgcctaaacccccccctgcaat
***nadh5
a:humanafrican (3) ;cacattcaactctcctaccgttattatattgcatcttcccgtagtttgacagaccccacctcagatggtgcccgatattgtcctctatgtctctcggtcctgccatatgtctctctccctaaacaactcaccttagcccccactaccaccctatagtccgctgtctaatcctgggtccaattcagatcccacatcccactccgcccctattaccttccctgatgtcatacccacatctttttgcttcaacttcacatgccgtcttttccgcacttcatccccctgtttactacccctaaacttgtccctccaacccttgtcgcgcccgttttacttcccaataccttctcccccc
b:humprobeuro (0) ;cacattcaactctcctaccgttattatattgcatcttcccgtagtttgacagaccccacctcagatggtgcccgatattgtcccctatgtctctcggtcctgccatatgtctctctccctaaacaactcaccttagcacccactaccaccctataatccgctgtctaatcctgggtccaattcaaatcccacatcccactccgcccctattaccttccctgatgtcatacccacatctttttgcttcaacttcacatgccgtcttttccgcacttcatccccctgtttactacccctaaacttgtccctccaacccttgtcgcgcccgttttacttcccaataccttctcccccc
c:gorilla (56) ;tacgtccagctttcctaccactatcatatcgcatcctcctatagcttagcagatcctatcttagacggcacccaatcccacccctcacgccttttcatttcactgcataccttctttcatcaacaacctacccctatatctatcacccccctacggcctgccactttactttaggttcaatctggactccgcaccttattccatctttgccgccctacctgacatcactcccacactctcttgcttcaaccccatatactgctccccttacatcctgtatttacatttaccacccctaaaaccatccccccaactcttgctacacctaccctgctcccttgcaccttttttctcc
d:gibbon (98) ;tacacctaaccctctcgctatcgccaaaccatatccttccgcaacttaacaaatgccacctcaaccagcactcaacaccgttccccacgtcccttcacctccatgcacgcccccccttatccacaatccacccccatcttcgcctcgtcctcacagcccaccatcctatcccaaactcaaccccggctccatactccaccttatttctaccgttccacccgacactacttttacccccctctacctcaaccccacacactgtccttcctaccctccgtacccacatctctcaccttctaaaccacccacctcaccctcactacagacaacctgctcttcaacgctcatcccctct
e:chimpanzee (18) ;tatgtccagctttcctgccattatcgtattacattctcccataacttgacagaccctatcctagacggtacccaatcccacttcctacgcctctccatctcactacgtactttttttcatcaacaatccgtcttaatacttatcactttcccacaacccgctatctcgccccaggtccagtccaaatctcacacctcaccccattcttgctaccctccctgatgccattcccacactcccctgcttcaactctgtatactgtctctctcataccctgtcttcacgttcactacccttaaacttatttctttatcccttgtcacactcattttgttccccagcattttcttctccc
f:pigmychimp (13) ;tatatccaacttttctaccattattgtattacattctcccatagcttaacagaccctactctagacggtacccaacaccatttcctatgcctttccatctcactacgtactctctttcaccaaccatccgtcttagtacttactactctcccacagcccgctatctcgccccagatccaatttaaacctcacacttcactccatccctactaccccctctgatgtcattcctacacccctctgcttcaactctatatactgtttctctcatactctgtcttcacgtttactacccttaaacctatttccttatcccttgccacgctcaccttgttccctaacattctcttctcct
g:baboon (164) ;tacatctaacccctttgctgccactgaactatgtctatacccaacctggcaaatgatactttaaccaatgtccgataccgcctcttacatctctccatttccatacacaccccctcctacccgtcatctaccccagccttcgctttgatcccacggcttatcaccccacttcaaatctagctccaatcttatactctactccatctccaccatttcatttgacaccactctcgtcctctcctgcctcaatcccacataccacctcccccacctcccatacccacattcctcatctcctagcccacccaccccatttccactatagataacctgcccttcaacgcccaccccccct
h:orangutan (22) ;ttcaccccattccctcgtcaccgctaagctacgcccacatctgaccaaatgactcattcccccgacggcatttagtaccacccccttcactcccccgccccactatatatctcctcccgccaatagtccacatccaccttctccataacttcgcaacccatcattctattctagacctgactcgaactctacgctctctcttacccccaccaccccccttaccgcttcttccgccccccccagaccttctcctgcttatcatcccccctacctcccacctccatgccttccgttactaggcccccccccctcatctccactacatacaacccgccctctaacacccactccctac
i:sumorang (44) ;tttaccccattccctcgtcatcactaagccacgcccacatctgaccaaatgactcactcccccgacaacacttagtaccaccttcctcgctctcccgccccgctatatatctcttcccgccagtagtccacatctacctcctccacacctccgcggcttaccgtcctatcccggacctgactcaagctctgcgccccctcttgcccctgccacccccctcaccgcctctctcatcccctccaaaccttctcctactcattgccccccctatatcctacctctatgccttccgttactagacccccccctctcatccccactatatacaacccgctctcttacacccactctctac
***nadh6
a:humanafrican (0) ;cttatcttttttacacgcatactttttgtcacgccctcgccattccgactactacgcttttctacgataccagcttaaaccccccgca
b:humprobeuro (0) ;cttatcttttttacacgcatactttttgtcacgccctcgccattccgactactacgcttttctacgataccagcttaaaccccccgca
c:gorilla (7) ;actattccctctacacgtatatcccttaccataccctcaccgccctgactaccacactcttctctaatgccaactcaaaccccttatg
d:gibbon (32) ;attatctcctctacgaatacaccccccgctgtacccctgacactctaactactacaccttcccccaacgccaacccgagcattccgtg
e:chimpanzee (5) ;cctgtctctttcatgcgcgtgccttttaccgcacccttactattccggttaatacatcctttttcagtgctaacttaaatctcttgtg
f:pigmychimp (0) ;cttgtttcttccgcacgtgcgccttttaccgcatcttcactattctggttaatgcatcctttttcagtgttaacttaaatctcttatg
g:baboon (49) ;accattcctcccacaaatacactctccactatattcccaacacctcagccactgtatctctcctcaatatcaacctaggcatctcatg
h:orangutan (5) ;atcaatttccccgtacgcatatccttcgtcgcacttccaccacctcaaccgccacactcccctctaacgccgattcggacatcccgtg
i:sumorang (5) ;atcaatctccccatacgcacatctttcgccgcaccctcaccgcctcaatcgctatactcttctctaacgccgattcagatattccgtg
***atp6
a:humanafrican (1) ;gcgtttggcagtacttctgaccttcacaatcggtacacttagttctttgatcccccgtctcatcacgctagggaattttctgattactcatctcgcccacctccccttcgtcgtcctactacttctctacgactctctcga
b:humprobeuro (0) ;gcgtttgacagtacttctgacctccacaatcgatacacttagttctttgatcccccgtctcatcacgctaggaaattttctgattactcatctcgcccacctccccttcgtcgtcctactacttctctacgactctctcga
c:gorilla (17) ;acgtttgatagtatctccgaccttcgccatcaatatgcctgattttttgaccccctgccctgtcgcaccgaggaactctccgactacccctctcgtccatccctcccttgccgtctcattattttcctataaccctcttga
d:gibbon (30) ;acattcaatagcatttctaatcttcgtcattaatatacccgatctcctgaccctccaccctaccgcaacaagaagccctttggccacccactctacctattcctattataccgtcttgcaccttcctcacaatccccccga
e:chimpanzee (3) ;acgttcgatagtactcccggttctcatcatcaatacactcagttctttaacttttcaccccatcacgtcaaggagtcttttgactactcatctcgcttaccttctcttcgtcgtctcataatttctctacggctctttcga
f:pigmychimp (3) ;gcgttcgacagtactcccggctctcatcatcaatacactcagttttttgatttctcatcccatcacgtcaagaagtcttttgactactcatctcactcatcttctcttcgtcgtcttgtaatttctctacgactctttcga
g:baboon (70) ;atactcgacaacacccccaactcctacaactagcccgctaaattccctaatccaccgtctcatcacaacgagagatcccttaactatctaccttgcctactcccatcacactatcccacccccttcctacggcccccctaa
h:orangutan (14) ;acacccagccatgccttcagccctcaccgctaacctatcaaacccttcgtccccctcctttgctataacaaaaggcctctcggccttttcccccatcttttttcccctcgtcactctatcctcctcccgtaatctcctcat
i:sumorang (15) ;atacctagccgtgccttcgacccttaccgctaacctgtccaacccttcgtcccaccccttcactataataaaaggcttctcagcctcttcctccatccttcttcctctcgctgctccacccccctctcgcagtctcctcgt
***atp8
a:humanafrican (2) ;tgtgctccatccactcaactacttcagcctatatttcagcgtttgg
b:humprobeuro (0) ;tgtgctccacccactcaactacttcagcctatatttcagcgtttga
c:gorilla (8) ;tgtgctccatctactcaattaccttaaattatactctaacgtttga
d:gibbon (13) ;cgtacctcgcctgcctacctacctccacccctctcttaacattcaa
e:chimpanzee (1) ;tgtactccatccactttattatctcaacctatactctaacgttcga
f:pigmychimp (2) ;tgtactccattcactctattatctcaacctatactctagcgttcga
g:baboon (28) ;cacatcttactcgtccaactattctcaaccctaccccgatactcga
h:orangutan (5) ;tacgtcctgcccgttctccctccccaattcaccccccaacacccag
i:sumorang (4) ;tacgccccgcccaccctccctccccaatccaccccccgatacctag
***mrRNA_12s
a:humanafrican (1) ;tgttattagactacactcagactagtaatacatttatccaatcacacccccactccgacatgacttcccacttctctaggtcaggtcctgtctacggccaagttaattactag
b:humprobeuro (1) ;tgttattagactacactcagactagtaattcatttatccaatcacacccccactccgacatgactccccacttctctaggtcaggtcctgtctacggccaagttaattactag
c:gorilla (9) ;tattacc aactacactcaaactagtagttcatctatccaaccatac attccgacacgattctctgcttctccaagtcaggttctatccacggccaagttaatcattag
d:gibbon (35) ;tgccaccgagtcaccttcaagttaactgtacatttgcctacttgcat ctcctaacgcgctcttccgaccttctaaaccagatcccacctgtaactagaccatccactaa
e:chimpanzee (5) ;cgttacc gactacattcaaattagtagtacatctatttaatcacac attccgacacgaccttctacttctttaagttaggtcttatccacggccaagcttactattag
f:pigmychimp (5) ;cgttacc gactacattcaaattggtagtacatctattcaatcacacccccattccgacacgaccctctacttctttaggttaggccttatccacggccaagtttattattag
g:baboon (100) ;tatcattgagtcacatccaagttaattgcacgtttgcctacccacgc cccctaatgtacttccctaaccttctggattagactccgttcataactggactatttattaa
h:orangutan (6) ;cgctgccaggccgtctctgaaccggtagcatgctcacccgattgtgtttttatttcggtataactcttcacccccccggaccgagttctacttgcgattggaccaaccgccgg
i:sumorang (7) ;tgttgccaggccgtctctgagccggcagtatactcacccgattgtgtttttatttcggtacaactcttcacttccccgggccgagttctgcccgcggttggaccaaccgccgg
***mrRNA_16s
a:humanafrican (1) ;actcctcgcac gatacctttctatttcactgcattagaaataacatgcccctatttctcggttaatcaccactttccaccatactactgttctcccgtcccccttcacattacactcagtgcggcgtttttacctactcctaacggtcctcgactctcattcgttacttcacaattcctcgttacgt
b:humprobeuro (1) ;actcctcgcac gatacctttctatttcactgcattagaaataacatgcccctatttctcggttaatcaccactttccaccatactactgttctcccgtcccccttcacattacactcagtgcgacgtttttacctactcctaacggtcttcgattctcattcgttacttcacaattcctcgttacgt
c:gorilla (26) ;acccatcacac aattatcttctaccccgctacgttagaaaccacacacccccacctctcggttaatcatcccccttcactatgctcctaccttctcgctctcccttatgccacatccagtgcaatattcttacttactcctaattaccctcgaccttcattcgctatcc ttgatcccttaacgtgt
d:gibbon (63) ;cccacctatac atccacctcccacactgccgcattaggaacaatgcacccctatttcttaattattcaccacccttacccataataccaccctcctacccccccctacatcacgttcagcgtaatatcttcactcattcctggctgtctccatcttctattcgctgtct ttagctccttcctgtac
e:chimpanzee (5) ;cctccccacac aattaccctctcttccgttacattagaaataacatactcctattcctcagttaatcaccactcctcactacactactaccttcccgccctcccttgtattacatttagcacgatattcttacttacttttaaccatctccgatcttcactcgttgtct atgattcattgctgtat
f:pigmychimp (11) ;cctccccacac aattatcttctcttccgttatactagaaataacatactcctacttctcaattaatcaccactcctcactacgctactaccttcccgccctcccttgtattacatttagcacgatgttcttacttacttttaaccacctccgatcttcactcgttgtct atggtccattaccatat
g:baboon (145) ;aacaactaccaaatttccttctcccaccgtcatgccaagggtcgtgtacctccattctttaaccgtttatcactcttactcacaatctcacccccccgtctttttctacactgtatccagtatagcacttctattcactcttaaccatcccagattcctatttaccatcc ctaactcattcatacgt
h:orangutan (20) ;aatccccatcaaaacttcctcccaccctgtcgcgcctaaggtagcacatttt tctcctaaccggctgcacatattcactgtaacactacctctttactcttctttgtgttgtgttcgatgcgatacctccgtatgtccccggttactttaatccctcgtccatcattc ctggtttactatcacgt
i:sumorang (15) ;aacccccacac aacctcccctcacctcgtcgcacctaaaatagcacattct tcttctaaccagctgcacacattccttgcaacatcacctctttacttttttttgtactgcgttcgatgcgatacttccgtacgtccccggccacttcaatccctcgtctatcattc ctggtttactaccacgc
Cytochrome Oxidase protein for 9 Hominids
humanafrican ;MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLSWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKS
humprobeuro ;MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEEPVYMKSchimpanzee ;MFTDRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIQFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSVGSFISLTAVMLMIFMIWEAFASKRKVLMVEEPSANLEWLYGCPPPYHTFEEPVYMKS
pigmychimp ;MFTDRWLFSTNHKDIGTLYLLFGTWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIQFAIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNVLSSVGSFISLTAVMLMIFMIWEAFASKRKVLMVEEPSANLEWLYGCPPPYHTFEEPVYMKS
gorilla ;MFTDRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNTKWSAAMLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFAIMFIGVNLTFFPQHFLGLSGMPRHYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMIWEAFASKRKVLMIEEPSTNLEWLYGCPPPYHTFEESVYMKS
gibbon ;MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSDTKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLDQTYAKIHFAIMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSFISLTAVMLMIFMIWEAFASKRKILMIEQPSTNLEWLYGCPPPYHTFEEPVYMKP
baboon ;MLINRWLFSTNHKDIGTLYLLFGAWAGVTGMALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTAVEAGAGTGWTVYPPLSGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTMGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTCAKAHFIITFMGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLTATILMIYMIWEAFASKRKVLLTEHPSTSLEWLNGCPPPHHTFEEPAYIKL
sumorang ;MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASATVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKEEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNTKWSAAILWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFITMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSAGSFISLTAVMLMIFMIWEAFASKRKVPMVEQPSTSLEWLYGCPPPYHTFEEPVYMKPE
orangutan ;MFADRWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPMMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLLPSFLLLLASATVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMVSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNTKWSAAILWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLNQTYAKIHFITMFVGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSAGSFISLTAVMLMIFMIWEAFASKRKVPMIEQPSTSLEWLYGCPPPYHTFEEPVYMKP
Mitochondrial Genes for 17 Fish (all third codon positions in protein-coding genes have been omitted)
***co1
a:articchar (0) ;cttgcttaatacctcttgcgctatatggtctcaccggtgggcttctcctcccaccccccccgttttagcgctaagaatcatgtccgagatctatca
b:brookchar (0) ;cttgcttaatacctctcgcgctatatggtctcaccggtgggcttctcttcccaccccccccgttttagcgctaagaatcatgtccgagatctatca
c:brookchar2 (0) ;cttgcttaatacctcttgcgctatatggtctcaccggtgggcttctcctcccaccccccccgttttagcgctaagaatcatgtccgagatctatca
d:salmon (0) ;cttgctcaatacctctcgcgctatacggtctcaccggtgggcttcccctcccatcccccccgctttagcgctaagaatcatgtccgagatctatcg
e:trout (4) ;cttgcccaatacctctcgcgctatatggtctcaccggcgggcctctcctcccatcccctccgtcttagcgctaagaatcacgtccgagatctatca
f:crossostoma (6) ;ctcgcctaccgccttttgcgccacgtggcctcaccggcaggccccttctcccgccccaccttccttacggcttgaagccacgtccgggaattatca
g:bichir (30) ;cctacccgacgccccttgcgctgtgcggtctcacctgtgggctctcctcttcacctcacctgctttagggctaccagtcacattcgggacaaacac
h:flounder (0) ;ctcgcccaacacctctcacgccacacggtaaattcggcaggccctccccctcattcaccccgccttgccgctatcggtcgcgtcatgctgctgcta
i:japaneseflounder (0) ;ctcgcccaacacctctcacgccacacggtaaattcggcaggccctccccctcattcaccccgccttgccgctatcggtcgcgtcatgctgctgcta
j:carp (6) ;ctcgtccaccgcctctcgtgccacgcggcctcacctgcgggtcctcccctccgctccaccctccttaccgctaagagccgcgtccgggagcaatca
k:goldfish (1) ;ctcgtccaccgcctctcgcgccatgcggcctcacctgcgggccccctccttcgctccaccctccttaccgctaagagccgcgtccgggaataatca
l:cod (6) ;ctcgcccaacaccttttgcgccacacggtctcaccggcaggccctcccttctacttccctcgctttaccgctagaagccacatccgggaattatcg
m:rajaradiata (10) ;attactcaacgtttcgcgcgctatatcttctcacttacgagtccccccctttgtcccctctgccttacggttatcaaccatgttagagaaaaatac
n:mustelusshark (3) ;actacccgacgcctcgcatcctgtatcttctcacttacgaacccctccctttgcccccctcgtcttacgatatcaagtcacgttagggacaaatac
o:catshark (0) ;actacctgacgccttgtgacgtacatcttctcacttacgagccccttcctttgcccctcccgtcaaacgacattcacttgcgccatagaaaaatgc
p:dogfish (10) ;attacctaatgttctgcgagccgtatcttctcacctacgaacccccttctttgccccccctgctttacgactatcagtcgtgttagggacaaatgc
q:dogfish2 (0) ;actacctgacgccttgtgacgtacatcttctcacttacgagccccttcctttgcccctcccgtcaaacgacattcacttgcgccatagaaaaatgc
***co2
a:articchar (0) ;cgccgccccgtgttaaatacgggcacccgtgggtctgccaatgagcgtctgtatggctctaaagtc
b:brookchar (0) ;cgccgccctgtgttaaatacgggcacccgtgggtctgccaatgagcgtctgtatggctctaaagtc
c:brookchar2 (0) ;cgccgccccgtgttaaatacgggcacccgtgggtctgccaatgagcgtctgtatggctctaaagtc
d:salmon (0) ;cgccgccccgtgttaaatacgggcacccgtgggtctaccagtgagcgtctgtatggctctaaaatc
e:trout (0) ;cgccgccccgtgttaattacgggcacccgtgggtctgccagtgagcgtctgtatggctctaaaatc
f:crossostoma (7) ;tgccgcttcatactaattatggccacccatagatccaccagtaaacgtctggacggctctaaactc
g:bichir (24) ;caccgttccatactaaacacggctacccataaatcttccagtagacaactgtacagcacttcttcc
h:flounder (0) ;ccccgtacagtgtaggactcagacacctgcggacccaccgacgagcatttgggcaatagttattta
i:japaneseflounder (0) ;ccccgtacagtgtaggactcagacacctgcggacccaccgacgagcatttgggcaatagttattta
j:carp (5) ;cgccgtcctacgttaaatacgagtgcccacgggtccgccagtaggcgtctgtacggctctaatttc
k:goldfish (0) ;cgccgtttcatgttaaatatgagtgcccacgggtccgctagtagatgtctgtacggctctaatctc
l:cod (2) ;cgtcgcttcgtgttaaatataggcactcgcggatctgctggtgaacatctggacgactctactttc
m:rajaradiata (7) ;taccattctgtgtaaaatatgaacacctatgaatattccagtaagtgattagacgattcaaatttc
n:mustelusshark (2) ;tgcaacttcacgtaaaatacgaacacctgcggatatgttagtaagcgtttggacgattcaacttct
o:catshark (0) ;tgtaatttcacgttaaatacgaacattcgtggatatactagtaagcgtcgggacgattcaactttt
p:dogfish (0) ;tgccattttatgttaaatatgagcacttgcggatatattagtaagtgtttagacgattcaactttt
q:dogfish2 (0) ;tgtaatttcacgttaaatacgaacattcgtggatatactagtaagcgtcgggacgattcaactttt
***co3
a:articchar (0) ;gcatctcacgtaaaatccaaagctacttttttgataccccagcaggcaccatttttgattaccaccattcg
b:brookchar (0) ;gcatctcacgtaaaatccaaagctacttttttgataccccagcaggcaccatttttgattaccaccattcg
c:brookchar2 (0) ;gcatctcacgtaaaatccaaagctacttttttgataccccagcaggcaccatttttgattaccaccattcg
d:salmon (1) ;gcatcccacgtaaaattcaaagctactttcatgataccccagcaagcaccatctttgattatcactattcg
e:trout (0) ;gcatctcacgtataatccaaagctacttgcatggcaccccagcaagcaccatctttgattaccgccgttcg
f:crossostoma (5) ;gcatctcttataccttttaaagccactctcacgaccccccagcgagcgccaactgccattaccgccattcg
g:bichir (10) ;gtgttccctgtaactttttaagctactctcattaccccccaaggagcactatttgccataaccgttattcg
h:flounder (0) ;ccatccactacacactcttggctcacctgcattgccctccaacgatcttcaccgttcccgctcgccacgca
i:japaneseflounder (0) ;ccatccactacacactcttggctcacctgcattgccctccaacgatcttcaccgttcccgctcgccacgca
j:carp (2) ;gcatccattacaccttccaaagccactctcatgaccccccagcgattgctatctgccattaccgccattcg
k:goldfish (0) ;gcatccattacaccttccaaagctactcttatgaccccctagcgattgctacctgccattaccgccattcg
l:cod (2) ;gcgtctactgcatactctaaagctactcgcacgacactttagcgatcaccacttttgcttatcgtcattca
m:rajaradiata (8) ;gtatccactattccttcctgagccattcgcatgaccttctagggagcaccgcttgccataactatcatttg
n:mustelusshark (1) ;gcacccattatccttccctgagctactttcacgaactcttaaggagcactaacttccataatcgccgtttg
o:catshark (0) ;ccacccactatctctccctaagccgtttttatgaactcccgaggagcactaattgccataatcgccgtttg
p:dogfish (6) ;gtgttcactgtttttccctaagctactctcatgaactctcaaggagcactgcctgccattattgtcattcg
q:dogfish2 (0) ;ccacccactatctctccctaagccgtttttatgaactcccgaggagcactaattgccataatcgccgtttg
***nadh1
a:articchar (0) ;actacgcgctaggtgtcccgccatcgtttctcatctcacaccgcatactcgcgcgccctttagccaggtatgtgagcgccactctggcgcccgcgcccccggtccgccggtgtggctccgcctatgcggcat
b:brookchar (0) ;actacgcgctagatgtcccgccatcgtttctcatctcacaccgcatactcgcgcgccctttagtcaggtatgtgagcgccgctccggcgctcacacccccagcccgccggtgtggctccgcctatgcggcat
c:brookchar2 (0) ;actacgcgctaggtgtcccgccatcgtttctcatctcacaccgcatactcgcgcgccctttagccaggtatgtgagcgccactctggcgcccgcgcccccggtccgccggtgtggctccgcctatgcggcat
d:salmon (0) ;actacacgctaggtgtctcgccatcgtttctcatctcacaccgcatactcgcgcgcccttcagccaggtatgtgagcgccgccctggcgcccgcactcccggtccgccggtgtggttccgcctacgaggcat
e:trout (2) ; tacgcgctaggtgtcccgccaccgtttctcatctcacaccgcatactcgcgcgccctttagctaggaatgtgagcgccgccctggcgcccgcgctcccggcccgccggtgtggccccgcttatgcggcat
f:crossostoma (7) ;aatacccgctaggcgttccgtcacgagaccttatctcacaccgcacacttgcgcacccttcagtctcattaacagcccccgccccggcgcccgcacccccggcccgccggcgcgaccccgcacatgtggcat
g:bichir (39) ; tatacattaaacatccgatcacggtaccttacctcatattatactgtcgtacatgcttcactctcttatacggcccccgccccggcatccacaccctataattaattacgtgaccctaaatattaggtat
h:flounder (0) ;tctacatgcctggcgtctcgccacagggtcttatctcacaccgcctatctgtgtgccctccggccaaacatacggcctccgccccggttcttgcgtccccaacccgccggcgcaaccccaattacgcggcat
i:japaneseflounder (0) ;tctacatgcctggcgtctcgccacagggtcttatctcacaccgcctatctgtgtgccctccggccaaacatacggcctccgccccggttcttgcgtccccaacccgccggcgcaaccccaattacgcggcat
j:carp (1) ;aatacccgctaggcgtccagccgcggtttctcgtcttacactgcacactcgcgcaccctctagcctcgttaataagcactgcttcggcgcccgcgctcccagcccgccaacgtgaccctgcacatgcggcat
k:goldfish (1) ;aatactcgctaggtgtccagtcgtggtttctcgtctcacactgcacactcgcgcaccctccagtctcgttaacaagtactgccccggcgcccgcgttcccagcccgctaccgcgaccctgtacatgcggcat
l:cod (18) ;aatatacattaggcgttcagtcacgattccttgtctcacaccgcattctcgcacgccctccggctaggtttacagcccctgccccggtgcccgcgccctaagtccgctagcgcgatctcgactacgtggcac
m:rajaradiata (11) ;aatacatactaagcactcgatcgctatttctcacgccatctaatccatttatgtatatactactttctagtttaaccaccgtttcagcttatgtacattctcactaataccacgatctcatatactagactc
n:mustelusshark (4) ;catcttcgctaaacacctaactgccgtttttcacgctacctaatccacttacgtatacatcagcctcatgtacaaccagcgttttagcattcgtatattccccctacctatatgatccaatgtctgaaattc
o:catshark (0) ;caccttcgctaaacacccaactactattctacacgttgtttaatccatttacgtacataccagtctcatgtttgaccagtgtctcaccattcgtatactcccacttacgttatgacttaacatctgaaactc
p:dogfish (6) ;catctccgctagatacctgactacggtttctcaccttacctaatccagttacgcacgcatcagcctcatatttaactggtgttttggtatacgtacactcacattacctacatgactccatgcatgagactc
q:dogfish2 (0) ;caccttcgctaaacacccaactactattctacacgttgtttaatccatttacgtacataccagtctcatgtttgaccagtgtctcaccattcgtatactcccacttacgttatgacttaacatctgaaactc
Mitochondrial Genes for 24 Land Mammals (all third codon positions in protein-coding genes have been omitted)
***cox1
c:mouse (4) ;aaattccctcattctacctcccccttgcccaactgtttacgccttccccctgcccaccggtgttctcaacttcttccgccttcgtttcctggaagccaggccctcgcaaatattcgtctaccccagata
d:rat (4) ;gaactcctttaccccacctcccctttgcttaaccgtttacgccctctccctgcctaccggtgttcccaatttcctccgtcttcgtctcctagaagccaggcctgcgcgaatcttcatctaccccagata
j:hedgehog (19) ;atcctccctcctcttgtctcccccttgtccgaccgtttttacccgccccctgctcaccgatgttttcaaattctgtcgccttgattacctagaaattaagcccgcgccgagctaaagattccccagtca
e:bat (5) ;atcttccttccccctacctccctctcgtccgaccgttcttgccctctccctgttcatcggtgttcataacccccgctgtcttggtcacttaacaattgggccttcgccgagtcgtggactccccagaca
a:doormouse (0) ;aaattcccttctcccattccccctctgcctatccaggtttgtactcctcccttccctatcgacgctcgtctctcgcctttcatgcctttcagagatcggagcttcgcaagtctacggactctccagaaa
b:doormouse2 (0) ;aaattcccttctcccattccccctctgcctatccaggtttgtactcctcccttccctatcgacgctcgtctctcgcctttcatgcctttcagagatcggagcttcgcaagtctacggactctccagaaa
f:elephant (12) ;gaacacctttaccccatctcccctttgcctaaccgttcttaccctcctcctgcccaccgatgttcacaaacttcgccgtcttgatctcttataaattgagccctcgtcgattcgtagactccacagaca
g:pig (0) ;gaacacccttcccccacctcctccttgcttaaccgttctcgccctccccctgctcatcgatgtttataacccccgctgtcttggtctcctacagattaggccctcactaattcgcggactccccaaata
h:aaardvark (2) ;gaataccctcttcccgtctctcttttgcttaaccgttcttgccttttccctgcccaccgatgtttacaatctccgccgtcttggtttcctactaattaggccctcatcaatacacggactctcctaata
i:guineapig (4) ;aaattccctcttcctatttcccctttgctcaactgttcatgcctttcctttgctcaccgatgtttataatctctgctgtcttggccacttagaagttgggcttttgcggatatgaagatttcccaaaca
k:mole (3) ;aaatttccccttcccacctccctctcgcccgaccgttttcactctccctctgcctaccgatgtttccaatcctcgctgccttcgtcacctacaaatcaggctctcgccgattcacggattccccagaca
l:cat (0) ;aaactccttccccccatttccctcttgcccaaccgttttcgtcctctttctgtttaccgatgttcacaattcccgtcgtcttggtctcctgaaaatcaggccctcattggtgcatggactctccagtta
m:cat2 (0) ;aaactccttccccccatttccctcttgcccaaccgttttcgtcctctttctgtttaccgatgttcacaattcccgtcgtcttggtctcctgaaaatcaggccctcattggtgcatggactctccagtta
n:dog (3) ;aaactttcttccctcacttcccctttgcccaattgttttcgctctccctctgctcaccgatgtttacaactttcgtcgccttggcttcctagaaatcaggccttcgccaatgcatggactccccagtaa
o:dog2 (0) ;aaactttcttccctcacttcccctttgcccaattgttttcgctctccctctgcccaccgatgtttacaactttcgtcgccttggcttcctagaaatcaggccttcgccaatgcatggactccccagtaa
p:horse (0) ;aaactccctccctccatcttccccttacctaaccgttttcgcccgccccctgcccaccgatgttcacaacctccgccgccttggtctcctacaaatcaggccctcaccaattcacggattccccagata
q:indrhino (1) ;aaattccttcccttcgtttctcccttgcccaaccattttcgcttgcctcctgcccaccgatgtttataaccctcgccgtcttggtttcctacaaatcaggccctcaccggttcacggacttcctagata
r:rhinoceros (0) ;gaactccctcccctcgtttcccccttgctcaaccgttctcgctcgctccctgtccaccgatgttcataacccttgtcgtcttggtctcctacaaatcaggccctcaccgattcacggactccctagata
s:cow cox3(1) ;aaactccctccctccgcctcccccttgctcaattgttttcgccctctctctgcttatcgatgttcataaactttgccgtcttggtctcctagaaatcaggcccttaccgatttacggattctacagata
t:sheep (0) ;aaattcccttcccccacctcctccttgcccaaccgttcttgccctctccctgcccatcgatgttcacaaacctcgccgtcttggtctcctagaaatcaggcccttaccaatctacggactccacagata
u:donkey (0) ;aaactccctccctccattttccccttacctaaccgttttcgcccgccccttgcccaccgatgttcacaacctctgccgccttggtctcctacaaatcaggccctcaccaattcacggattccccagata
v:hippopotamus (5) ;aaactccccccccctgcctcccctttgctcaaccgttctcgccctctccctgcccaccgatgttcacaaaccctgccgccttggtctcctagaaattaggctctcaccgatttgcggactccacagata
w:rabbit (1) ;gaactccctccctccacctcccccttgcccaactgtttttgcccttcctttgcccaccgatgttcacaacccccgtcgccttggcctcctgccaatcgggcccttgcgaatgaacagactcccctgact
x:armadillo (4) ;aacctctctcccctcatttctcccttgcccaaccattcatgccctccccctgcccatcgatgtttacaacttccgctgccttggtctcctattaattaggcccttgccaatgagtggattcccctgatt
***cox3
c:mouse (3) ;tcccgtcacctccctatcagagaccatgcacgggtacgtccccctgcgtccaacctatccgccttttaacatctgccctacct
d:rat (0) ;ccccgtcatcctcctatcaaagaccatgcacgggtacgactccctgtgtccaacctctttgccttttaacatctgccctacct
j:hedgehog (23) ;tctaatcttccccatatctaagtccatgcacagatctaaatttcggcgtcaatcttagccattacaggatttctacattatc
e:bat (1) ;ctctgtcacctttttgctaaagtccgtgcacagtcctaacttcttgtgtccctccttgttgccatatgacatttgccttacct
a:doormouse (0) ;ccctgtcaccctcacgccaaagtatatatatgagcccgactttcagcttacaccctcttcgccttatgacacccgcactacct
b:doormouse2 (0) ;ccctgtcaccctcacgccaaagtatatatatgagcccgactttcagcttacaccctcttcgccttatgacacccgcactacc
f:elephant (12) ;tccaaccacccttacatctgggtccgtgtatagacccatacccctgcgacactcctcttcattatatagcatctatactacct
g:pig (0) ;cctaacccttcccttactaaaattcgtgtatagacctgcacccctacgtccatcccgcccgccacatggtatccgtcctacct
h:aaardvark (0) ;ctttatcacccttttatcaaaaaccgtgcacaggcccgttcactgacgaccatccttctcgccacagagcatccgtcctatct
i:guineapig (9) ;tctcatcactcttttgccaaggaacgtgtatagtccctaatacttgcgtccatctcgcccgccatttggtttccgcccaatct
k:mole (2) ;ttctgtcacccacttgccaaagtccatgcacaggcattcactcctgcgtccatcctgcccgccacatgacatccgtacaacct
l:cat (0) ;cctagctctctcaacatcaaaatccatgcacaggcccgatcccctgcgtccctccttctcgccatatgacatctgtttaacct
m:cat2 (0) ;cctagctctctcaacatcaaaatccatgcacaggcccgatcccctgcgtccctccttctcgccatatgacatctgtttaacct
n:dog (2) ;cccaatcgcccttacattggagtccatgcgcgggcccgatctcctgcgtccctctttcttgccatatgatatctgtccaactt
o:dog2 (0) ;cccaatcgcccttacattggagtccatgcgcgggcccgatctcctgcgtccctctttcttgccatatgatatctgtccaactt
p:horse (0) ;cccagccttccacttatcaaaattcatgcacagtcccgcatctctgcgtcactgcttcccgccatatggcatctgtcctgctt
q:indrhino (0) ;cccagtcctccccacatcaaaatccgcgcatagtcccgcacacctgcgtccctccttcccgccacatggcatctgttctattt
r:rhinoceros (0) ;cccagccctccccatattaagatctgtgcacagtcccgcacacctgcgtccctccttcccgccacatagcatctgtcctacct
s:cow cox3(2) ;tctaaccacccacacatcagaatccgcgcacagacccgcacccctgtgtccttcctactcgccacatggcatttgttttacc
t:sheep (2) ;cccaatcgcccccacatcagaatccgcgcacagacccgcactcctgcgtccttcctgcctgccacatggcatctgttttgcct
u:donkey (0) ;cccagccctctccttatcaaaattcatgcacagtcccgcacctctgcgtcactgcttcccgccatatggcatctgtcctgctt
v:hippopotamus (4) ;cccaaccatccacgtatcagaatccgtgcgcagacccgaatccctgcgtccctcctgcccgccatatggtatctgtcctacct
w:rabbit (1) ;cccagcctcccatgtaccaaggtccatgcacaggcccgaacccctgcgtcacacccctccgccatatgacatccgccttacct
x:armadillo (2) ;cccaatccttcctacattaaaatacatgcacgggcccgaacctctgcgtccctcctgcctgccacatagcttctgtactgcct
***nadh2
c:mouse (12) ;atactttatattcgacacgaatctatgcgaaaacgacatcaacctcttaaaatcacacaacctttaaaacttccacctttcccaataccacctaaattaccctcttctttgaacattccaattgcacaactcctctcctatcgctttctaatataatcttacactattctttcttcctatgtaacctattatatataacccaaccacaatttccctatagatctctgccaccta
d:rat (23) ;atactttatactccacatgaatccatgtgaaaacgacatcaacttcttaaaatcacacaacatttaaaatttccacctaccccaatatcaccctatttacactctccattgatcgttccaaacgcacaacaattctctcatcgttatacatgataaactcatactatccttccttcctatgccacctattacatataacccacacacaactcccctttagctctcttccaccta
j:hedgehog (60) ;atttcttatttaaagtttgtcgctatataacaacgatattacaccatttttatactgacaattccataactctttgtcatcccgtcactaacctttttccctcctaattcgtctagcgccaatgcataacaaatttactataattaaaaataatgcacttttagccttcttctttactgaacattatattttatttaagctaacaaataatattctattcctttcttcattattt
e:bat (68) ;atatttatcgtaaagtacgtcgatgtatactcccggcattacattataatttcatacaaatcccctcaattctttgtcatttcttccatccccttattcccaaattaccttactgttgttatcacacaacacatctcccatacttttaccaaaccttcacataacatttctctataccgagttacttacaatatataagcttaacacatcttctctattcatctctacctctttt
a:doormouse (0) ;ctacccttccttatgtctgtcgctacgtgagcacgacggtacacttcatttaattagttacttccatcgcctccattttgttctccaaccttttaattctctcacctcctgaacagcgccgctgcaatactcgcttcctataattcattaaaactttactataatgccttccactagtcgtcccttcataacatattagattgacatataattattcttctcttctacctgatct
b:doormouse2 (0) ;ctacccttccttatgtctgtcgctacgtgagcacgacggtacacttcatttaattagttacttccatcgcctccattttgttctccaaccttttaattctctcacctcctgaacagcgccgctgcaatactcgcttcctataattcattaaaactttactataatgccttccactagtcgtcccttcataacatattagattgacatataattattcttctcttctacctgatct
f:elephant (21) ;ctgcttctcctcacacatgtcgacgcacacacacgacatcacaccatcttattacaaatacgtccaaagcttctatcttgcaccccattttcctaatgcactaacaattcgcctactgccactatattacacctctctcatcctttcaactatttctcttacaacatttcctcataccaagtactacataatattttagcttaccacacttccctccttcatttctacatatctg
g:pig (8) ;atatacattgtaaagtatgtcgctatataattacgacatcacactatcttaatacaaatttgtctacaatctccaccttgcccagcctcctcctaattccatcatcacctgattattgccaacgcgtaaaacatcttctacacttttcagtgactttcacataaccttttcccataacgagtaacctacaatgctttagcttgacacatctccatttttcctttctacgccccta
h:aaardvark (11) ;ttatttattattaaacatgtcgacgcacaacactgacatcctcctctttttttattcacccttccttacttcctaacttccacgtccacctcctaattcaacaatccaccgtctactgccagcatacaacacctctcttaccttcttatatttctctcttatatcgcttctccatacccaaccttctataatattttagcttaaaaataattcattcttcatttctacattcttt
i:guineapig (22) ;cttcattacctaacacttgtcgctatacgattacgacatccttctttatcagtatcacacaatccttactctctatcttgtcttccattatcttatctttcacatactccgactgctgccagcgcataactcatttattatcactctataaaactctcacttcacattttcctgcaataaatcacgcataatgtattagctacacacatctctattcttcttttctacatatttt
k:mole (7) ;ctgtttcttgtaaggtctgtcgatatataattatgacatccccctatttcaacataaatacctccataatctctaacttgcccctcaccacccaaacgctatcataatccgactagcgttagcgcaaaaaacatcctctatcctttaatattaccttcatgtatccttttcacataccgagccacatacaatacattagcttgataaaccttccttcttcatttctacatctctg
l:cat (0) ;ccatttattgtaaagtgcctcgctgtataataatgacatcacagtatcttaatctaagactatccataatccccaccttgccactcaccaccctaattctcacatcaccttattgatgccaacgcaaagcacattttccatactcttcaataacgctcacataacctttttaaatatcgtttaacttccaatacagtggcttgacaaatctcccttattcatttctgcatctctg
m:cat2 (0) ;ccatttattgtaaagtgcctcgctgtataataatgacatcacagtatcttaatctaagactatccataatccccaccttgccactcaccaccctaattctcacatcaccttattgatgccaacgcaaagcacattttccatactcttcaataacgctcacataacctttttaaatatcgtttaacttccaatacagtggcttgacaaatctcccttattcatttctgcatctctg
n:dog (0) ;ccatttatcataaagtatgtcgctatataataattacatctcagcatcttagttcaaattcatccataatccccaccttgcccttcaccaacctaattccctcataaattgcacgctgccagcgcaaaacacatttctcttactcttttattaccttcatttaacatttttacatatcaattaacctacactacagtagcttgacaagcttcctttactcatttctacatttttg
o:dog2 (0) ;ccatttatcataaagtatgtcgctatataataattacatctcagcatcttagttcaaattcatccataatccccaccttgcccttcaccaacctaattccctcataaattgcacgctgccagcgcaaaacacatttctcttactcttttattaccttcatttaacatttttacatatcaattaacctacactacagtagcttgacaagcttcctttactcatttctacatttttg
p:horse (4) ;ctattccttgtcaagtatgtcgatatataataattacatcccactatcttaatacaagtttacccataatccccaccttgcctctcacccacctaattccctcatcatctggctactgccaacgcgcaacacctctcatatacttttcagttaccttcacataaccttttctcataccaagtcacctataatacattagcttgaacaacccctatttctccttctcctctttgat
q:indrhino (3) ;atgttcctcgcaaggtatgtcgatgtataattattacatccctctatcttaatacaaatttacccgcaatccctaccttgcccttcacctacctaatgccctcatcaaccgcctactgccaacgcacaacacatctcatatactcttctattaccttcacataacctttttacataccaagtcactcatattacattagcttgacacatctcccttattcctttctacacatcta
r:rhinoceros (1) ;atgttcctcgcaaagtacgtcgatatataattatgacatcccactatctttatacaaatttacccataatccctaccttgcccttcacccacctaatgccctcatcaaccgcttactgccaacgcataacacatcccatatactcttctattaccttcacataaccttttcacataccgagtcactcataatacattagcttgacacatctcccttattcctttctacataccta
s:cow cox3(4) ;atatttcttataaagtatgtcgctgtataacaactacatcccactatctttatataactttatccatcatctccaacttgcccctcacccacctaatttcctcatcaccttgttactgccaacgcgcaacacatctcttatatctctgcataaccttcacataacctttccccataacaagtcacttacaatacaatagcttcctaaatctccatttttcatttctacatctttg
t:sheep (0) ;atatttcttgtaaagtatgacgctatataacaactacatcccactatttttatataactttatccatcatctccaacttgcccctcatccacctaatctcctcatcaccttactaacgccaacgcgtaacacatctcctatatctctgcataaccttcacgtaaccttttcccataacgagttacctacaatacagtagcttcccacatctccactcttcatttctacatctctg
u:donkey (2) ;ctatttcttgttaagtacgtcgatatataataattacatcccactatcttaatacaagtttacccataatctccaccttgcccctcatccacctaattccctcatcacctggctactgccagcgcataacacctctcatatacttttcagttaccttcacgtaaccttttctcataccaagtcacctataatacattagcttgaacaacccctatctctccttctcctctttgat
v:hippopotamus (6) ;ttgtcttacataaagtacgtcgttacatacccactgtatccccctatcttaatataaatctacccataatctccaccttgcctcgcatccccctaattccctcatcaccttactactgctagcgcacaacacatctcccatatttccctataaccttcacataacctttctccgtaacgagtcacctataatacaatagcttgacacaactccattcttcatttctacatctctg
w:rabbit (7) ;ctacttattcttaaacgtgtcgacatataagcacgacatcataccctattaatataacccactccgtcatctctaacttgcccatcacctccctaattccctcatccactgactaatgccagcgcaatacaaacttcctataattttcaataaccttcatatagtactttccaatatcgaattacgcataatatttaagcttgacacatatacctttttcatttctacgccttta
x:armadillo (6) ;ttatttattttaagacatgtcgttatacaatcccgacatcccagtatttaaatataatcctgtcctaaatctccaccttgcacctcacccacctaatcatctcctcacctgactactgccaacgcaaaaatcttttcctataattctaacaaaccttctcatcacatttccccgcaacaattcacacataatatataagataaaaatattcccttccttcatttctacatattta
***atp8
c:mouse (0) ;ttttacatcatctattttcgtctcaaccctcccatcccataataattcccacta
d:rat (2) ;ttttacatcacctatttttatctcaaccgccccaacacgaaacaactcccccta
j:hedgehog (7) ;tttcattttttctatatacaaatcaataaatacaaactaacactaatctctcta
e:bat (0) ;ttttacttcatttatatacatcacatcatcaccaacatacaactatcccctcta
a:doormouse (0) ;tttcacttcataacacgcccacacaatcccaccagatcctaaaaaatccaacta
b:doormouse2 (0) ;tttcacttcataacacgcccacacaatcccaccagatcctaaaaaatccaacta
f:elephant (25) ;atttgcgttcccaatttccactaatactctttcagacaaatcgttacccact
g:pig (0) ;ttttacactatttattttcatcaaatccgcgtctgacccaaaagattctcccta
h:aaardvark (2) ;atttaccttatctatctttatcaaatccctaccaactccactaagctccatcta
i:guineapig (0) ;tttcgttttatctatctctatctcattattaacttctcacaaaatatccatcta
k:mole (0) ;tttcacttcacctattttcatcaaaacctcgttatcacttaaaaaccccctcta
l:cat (0) ;ttctacattatctatgttcatcaaatcctcaccatcacctaaagaaccccacta
m:cat2 (0) ;ttctacattatctatgttcatcaaatcctcaccatcacctaaagaaccccacta
n:dog (0) ;ttttattttttctatcttcatcaaatccgaaacatcgtgcggaaaactccccta
o:dog2 (0) ;ttttattttttctatcttcatcaaatccgaaacatcgtgcggaaaactccccta
p:horse (0) ;ttttaagttatctatgttcatcaaatccacagtaacatacaaacgcccccacta
q:indrhino (1) ;ttttacactatctatattcctcaaatcctcactaccactcatacacccccacta
r:rhinoceros (0) ;ttctacgttatctatattcctcaaatcctcgctattacccacacactcccactc
s:cow cox3(0) ;tctcattttttctatattcgtcaaaatacaactcccatttaaaaactctctt
t:sheep (2) ;tctcatcttttctatattcatcaaaatacaatttacacccaaaaactccctt
u:donkey (0) ;ttttaagttatctatgttcatcaaatccatagcaacatgcaagtacccccacta
v:hippopotamus (1) ;tttcaccttttctatattcatcaaaacaccaaccctcccaaaacaccccctctc
w:rabbit (1) ;tttcacgttatctatctactcaaaaaccatactagcccactctctcccccacta
x:armadillo (3) ;ttttacgttctttatctactataatatttcccccacaaacaaatattccctcta
Mitochondrial Genes for 12 Whales and Dolphins
***cyb
a:saddlebackdolphin (3) ;tcctcaccctgtatacttcctattttaacccattaacatttcttcggccccctacctttcaccccctacgcccatcacttttattactctaaaccactcacc
d:blackdolphin (1) ;ttctcaccccatacactcccaacttcaatccactattatccctttggtcttctacctcccacccccctcgcccaccacttttattactccaaaccactcacc
g:longfinpilotwhale (0) ;ttctcacactatatactcccaactctaacctattattactcccttggcctcctaccccccatccccctcgcccactacttttattactccaaaccgctcatc
l:whitebeakdolphin (3) ;tcctcataccgtatatccccaattccaacctattaccactcctctggcctcctacctttcattcccctcgcccactactcttattatctcaaactacccacc
m:duskydolphin (0) ;tcctcaccctatacactcccaactctaatccactattatccctttggtctcccacctctcacccccctcgcccaccacttttatcaccccaagccactcacc
n:rightwhaledolphin (1) ;tcctcaccctgtacactcccaacttcgaaccactactacccctttggtcccctacctcccactcccctcgcccaccacttttattatcctaaaccactcacc
s:bottlenosedolphin (2) ;tcctcaccctgtacacttcctattttaacccattaatactccttcggccccctacctcccaccccctacgcccatcacttttattactctaaaccactcacc
e:belugawhale (4) ;tcttcatctcatacctttttaactccaacctattactacccctctggcctcccatacttcacccttcccacctaccacccccaccatttcaaattactcatc
o:gervaiswhale (2) ; ttttacatcatattcctctaattctatcccattcccacccaaccgaccccctatatctcatcccctctgcacaccatctttattattctccactatctacc
q:peruvianbeakedwhale (6) ; ttttgcgttatacttctctaactccaccctattcccatcctaccgatcccttacatcttaccttccctgcacatcacttttattattttctactattcatc
t:ziphiusdolphin (3) ;tctttacactatattctcccaaccctacccccctcccgcccaaccggctccctataccccgcccccctcgcctaccatccttattaccccctgctatctgtc
h:boutou (11) ;ttctcaccctacatctctccaaccccacttcattaccaccctcctggcccctcacactccatccccctcatccatcgcccccaccaccatacattgcctacc
r:burmeistersporpoise (4) ;ttttcaccccacacctccccagctctaacttatcaccatctccccagcctcccataccctattccttctatctgccgtcctcattaccccaaattacctatt
b:bowheadwhale (2) ;tcctcatattgtacccctctaacctcatcccgttaccacctacccaacctcccacatcctaccccccccgctcaacactcccgctactccacaccactcgtt
c:finbackwhale (1) ;tccccacgccgtgcccctctagccccaccctattaccacccacccgacccctcacaccttgttccccccgctcaacaccctcgctgtttcacactacccacc
f:greywhale (5) ;ttcccacaccgtgcccccccaaccccatcctattaccacccacccaattctttacaccttacccctcccgcccagcatccccgctaccccacactacccacc
i:pigmyspermwhale (5) ;tcctcgcgccataccctcccaatcccgtctccccaccatccacccaatttctcacaccccaccccccccgcccgacattctcactacctcatacagcctacc
j:dwarfspermwhale (7) ;tcctcgcaccatgccctcccaaccccacctcctcaccgtctactcgactctctgcattctaccccccccgcccgacacccttgttaccctatacaacccacc
k:spermwhale (9) ;tcctcacatcatacctcctcaaccccataccgctaccacccactcaactcctcgcacctcatctctctcactcagcgccctcattactacacacaacccacc
p:humpbackwhale (0) ;tccccataccgtatacctccaacctcaccctattaccacccacccgacctcttacaccttgccccccccgctcaacaccctcgctgcctcacactactcacc
***mrRNA16s
a:saddlebackdolphin (0) ;ata tccaatctcggtacttttagcaaaca gtcatacccttaatttatattcc
d:blackdolphin (1) ; a tccaatctcggcacttttagcaaata gtcatatccttaattcatattcc
g:longfinpilotwhale (1) ;ata tccaatcccggcactcttagcaaaca gtcatacccttaatttatactcc
l:whitebeakdolphin (3) ;aca tccaacctcggcatttttagcaaata gtcataccctcaatccatattcc
m:duskydolphin (0) ; a tccaatctcggcacttttagcaaata gtcatatccttaattcatattcc
n:rightwhaledolphin (3) ;ata tccaatctcggcacttttagcaaata gtcatatccttaattcatgtccc
s:bottlenosedolphin (0) ;ata tccaatctcggtgcttttagcaaata gtcatacccttaattcatattcc
e:belugawhale (4) ;atattccaattccggtactttcaacaaaca gtcatgtcctcaacttgtgttct
o:gervaiswhale (5) ;aca cttaatttcggtaattccaataattta atcatgtctccaactcatgttct
q:peruvianbeakedwhale (6) ;aca cttaatttcgataatttcattaatcta atcatgttctcaactcatattct
t:ziphiusdolphin (4) ;atg cctaacttcggtgatttcactaatcta gtcgtgtctccaacccgtgttcc
h:boutou (12) ;aca cctagtttcgatattccctctaaaca gtcatgtttccagcttacgttcc
r:burmeistersporpoise (4) ;acattccaatttcggtaattttatcaaaca gtcgtatccccaacttatgttcc
b:bowheadwhale (1) ;acg ccctatttcggtaatctcatcaactca gtcatgcccccagcctacattcc
c:finbackwhale (2) ;acg ccctgttttagcaatctcaccaactta gtcacgccctcaatctatacccc
f:greywhale (7) ;acg ccctgtttcggcaacctctatcaaccaagccatgcccccaacctatatttc
i:pigmyspermwhale (3) ;aca cccaatttcggcaacctcagccctcta gtaatgcccttcgcttacattcc
j:dwarfspermwhale (4) ;ata cccaatttcggcgactccaccaacta gtaatgtccttagctcacacttc
k:spermwhale (6) ;aca cccaacttcgacaacctctcccccctaagtaacgtcccccgctcacatccc
p:humpbackwhale (2) ;acg ccctattttagcaatctctatcccctaagccatgtccccaacctatgtttc
***mrRNA12s
a:saddlebackdolphin (1) ;tttatccattcgccaacttgaattttaaaacgaccccagctataatc ccctaatcaaatcttataa
d:blackdolphin (0) ;cttgtctactcgccaacttgaattttaaaacgaccccagctataatc ccctaatcaaatcttataa
g:longfinpilotwhale (2) ;tttgtctgctcgccaacttgaattttaaaatgacctcagctacaatc ccctaatcaaatcttataa
l:whitebeakdolphin (3) ;tttgtctactcgccaacttgaattttaaaatgaccccagctataacc ccctaatcagatcttataa
m:duskydolphin (0) ;tttgtctactcgccaacttgaattttaaaacgacctcagctataacc ccctaatcaaatcttataa
n:rightwhaledolphin (0) ;tttgtctactcgccaacttaaattttaaaacgaccccagctataatc ccctaatcaaaccttataa
s:bottlenosedolphin (0) ;tttatctattcgccaacttgaattttaa acgaccccagctataatc ccctaatcaaatcttataa
e:belugawhale (4) ;tttgtctacccgccgacttgacctttaa acgacctcaactgtaacc tcccaatcaaaccttatga
o:gervaiswhale (3) ; ctgttcacctattagcttatcccctag acggtcttgactgtattc tccacgtcagatcctatga
q:peruvianbeakedwhale (3) ;tctgtttacctattagtttatctcttag atggttttaattgtattt tttatgtcaaatcctatga
t:ziphiusdolphin (4) ;cctgtacacctattagcttatcccccaa acgattctaactgcatcc tctatattaagtcttgcga
h:boutou (12) ;cttgttcacccgccaacttaactctcaa gcagttttaattgtaacc ccctaaccaaattctgtga
r:burmeistersporpoise (1) ;tctgtctactcgccaacttgaaccttaa acgatctcgaccgcaacctccctaatcaagtcttataa
b:bowheadwhale (2) ;ctcgtacacctattaacccaacccctag acgatcttaactgtattc ttctaattaaacttcgcgg
c:finbackwhale (5) ;tccgtacacctactaacctgccccttg gcaatcttaaccgagctctcccatattaaatttcgcgg
f:greywhale (1) ;cccgtacacctactaacctgccccttag acgatcttaactgagctttcccatattaaatttcgcgg
i:pigmyspermwhale (1) ;cctgaatgtctactgacctgccccctaa ataatcccagtcgcattc cctcaaccgaactttatga
j:dwarfspermwhale (2) ;cctgaatacctactgatctgtcccctaa acaaccccagtcgtattc cctcaaccgaactttgtga
k:spermwhale (5) ;cccgtatacctactaacccaccccttaa atgatcttagccgcaccc ccttaatcaaaccttacga
p:humpbackwhale (2) ; ccgtacacctactaacctgccccttg gcaatcttaactgagctctcccacattaaacttcgcgg
***cyb
a:saddlebackdolphin (3) ;tcctcaccctgtatacttcctattttaacccattaacatttcttcggccccctacctttcaccccctacgcccatcacttttattactctaaaccactcacc
d:blackdolphin (1) ;ttctcaccccatacactcccaacttcaatccactattatccctttggtcttctacctcccacccccctcgcccaccacttttattactccaaaccactcacc
g:longfinpilotwhale (0) ;ttctcacactatatactcccaactctaacctattattactcccttggcctcctaccccccatccccctcgcccactacttttattactccaaaccgctcatc
l:whitebeakdolphin (3) ;tcctcataccgtatatccccaattccaacctattaccactcctctggcctcctacctttcattcccctcgcccactactcttattatctcaaactacccacc
m:duskydolphin (0) ;tcctcaccctatacactcccaactctaatccactattatccctttggtctcccacctctcacccccctcgcccaccacttttatcaccccaagccactcacc
n:rightwhaledolphin (1) ;tcctcaccctgtacactcccaacttcgaaccactactacccctttggtcccctacctcccactcccctcgcccaccacttttattatcctaaaccactcacc
s:bottlenosedolphin (2) ;tcctcaccctgtacacttcctattttaacccattaatactccttcggccccctacctcccaccccctacgcccatcacttttattactctaaaccactcacc
e:belugawhale (4) ;tcttcatctcatacctttttaactccaacctattactacccctctggcctcccatacttcacccttcccacctaccacccccaccatttcaaattactcatc
o:gervaiswhale (2) ; ttttacatcatattcctctaattctatcccattcccacccaaccgaccccctatatctcatcccctctgcacaccatctttattattctccactatctacc
q:peruvianbeakedwhale (6) ; ttttgcgttatacttctctaactccaccctattcccatcctaccgatcccttacatcttaccttccctgcacatcacttttattattttctactattcatc
t:ziphiusdolphin (3) ;tctttacactatattctcccaaccctacccccctcccgcccaaccggctccctataccccgcccccctcgcctaccatccttattaccccctgctatctgtc
h:boutou (11) ;ttctcaccctacatctctccaaccccacttcattaccaccctcctggcccctcacactccatccccctcatccatcgcccccaccaccatacattgcctacc
r:burmeistersporpoise (4) ;ttttcaccccacacctccccagctctaacttatcaccatctccccagcctcccataccctattccttctatctgccgtcctcattaccccaaattacctatt
b:bowheadwhale (2) ;tcctcatattgtacccctctaacctcatcccgttaccacctacccaacctcccacatcctaccccccccgctcaacactcccgctactccacaccactcgtt
c:finbackwhale (1) ;tccccacgccgtgcccctctagccccaccctattaccacccacccgacccctcacaccttgttccccccgctcaacaccctcgctgtttcacactacccacc
f:greywhale (5) ;ttcccacaccgtgcccccccaaccccatcctattaccacccacccaattctttacaccttacccctcccgcccagcatccccgctaccccacactacccacc
i:pigmyspermwhale (5) ;tcctcgcgccataccctcccaatcccgtctccccaccatccacccaatttctcacaccccaccccccccgcccgacattctcactacctcatacagcctacc
j:dwarfspermwhale (7) ;tcctcgcaccatgccctcccaaccccacctcctcaccgtctactcgactctctgcattctaccccccccgcccgacacccttgttaccctatacaacccacc
k:spermwhale (9) ;tcctcacatcatacctcctcaaccccataccgctaccacccactcaactcctcgcacctcatctctctcactcagcgccctcattactacacacaacccacc
p:humpbackwhale (0) ;tccccataccgtatacctccaacctcaccctattaccacccacccgacctcttacaccttgccccccccgctcaacaccctcgctgcctcacactactcacc